University of California, San Francisco
Site Search:       
  About UCSF     A - Z Web Listing     UCSF Search     Campus Directory



Complex Neural and Biological Systems

Theoretical and computational modeling have become critical tools in the evaluation of complex systems ranging from networks of neural elements and multi-cellular complexes, right up to whole organs such as kidney, heart and brain. Understanding the function of these systems requires the integration of data from many different types of experimentation and the derivation of testable hypotheses that can distinguish between alterative models. Specific areas of interest are:

  • Measuring the collective behavior and interactions of neural elements, developing novel techniques for recording and analyzing large neural circuits and determining interactions among their many elements.
  • Developing interfaces between neural elements and external devices including neural and musculo-skeletal prostheses.
  • Developing a description of non-linear, non-equilibrium dynamic systems to understand pattern formation and evolution.
  • Analyzing and modeling pathways for genetic regulation and interaction using information from genomics and proteinomics.
  • Understanding and modeling the complex interactions among signaling pathways that regulate development and the responses to the external environment in health and disease.

Complex Neural and Biological Systems Courses at UCSF

Course Title Instructor
Biophys 203 Mathematical Foundations of Biology Dr. Miller
Bioeng 246
Cardiac Mechanics
Dr. Guccione
BMI 203 Introduction to Biocomputing Algorithms Dr. Ferrin
BMI 204 Introduction to Object Oriented Programming Dr. Ferrin
BMI 206 Introduction to Bioinfomatics Dr. Babbitt
Neurosci 201A Basic Concepts in Cellular and Molecular Neuroscience Dr. Reichardt
Neurosci 201B Basic Concepts in Developmental & Systems Neuroscience Dr. Doupe
Neurosci 202 Neuroanatomy Dr. Basbaum
Neurosci 222 Signaling in Neurobiology Dr. Julius
Neurosci 225 Neurobiology of Disease Dr. Messing
Neurosci 228 Neurochemistry and Neuroendocrinology Dr. Bredt
Neurosci 230 Membrane Biophysics and Synaptic Physiology Dr. Schnapf
Neurosci 233 Developmental Neurobiology Dr. Rutenstein
Neurosci 235 Sensory Transduction Dr. Levine
Neurosci 240 Neurobiology of Vision Dr. Copenhagen
Neurosci 242 Thalamus, Cortex and Perception Dr. Schreiner
Neurosci 244 Sensory-Motor Coordination Dr. Lisberger
Neurosci 245 Neurobiology of Behavior Dr. Doupe
Neurosci 247 Theoretical and Computational Neuroscience Drs. Miller, Sabes

Faculty with research programs related to Complex Neural and Biological Systems

Patricia Babbitt Biophamaceutical Sciences babbitt@cgl.ucsf.edu
Nancy Byl Physical Therapy and Rehabilitation Science byl@itsa.ucsf.edu
Maurice Cohen Radiology cohen@ucsfresno.edu
David Copenhagen Ophthalmology cope@phy.ucsf.edu
Ken Dill Pharmaceutical Chemistry dill@maxwell.ucsf.edu
Thomas Ferrin Pharmaceutical Chemistry tef@cgl.ucsf.edu
Julius Guccione Surgery julius.guccione@med.va.gov
Donna Hudson Family and Community Medicine hudson@medisun.ucsfresno.edu
C. Anthony Hunt The BioSystems Group hunt@itsa.ucsf.edu
Don Jewett Orthopaedic Surgery jewett@abratech.com
Hao Li Biochemistry and Biophysics hli@biochem.ucsf.edu
Stephen Lisberger Physiology, Howard Hughes Medical Institute sgl@phy.ucsf.edu
Michael Merzenich Otolaryngology merz@phy.ucsf.edu
Kenneth Miller Physiology, Otolaryngology ken@phy.ucsf.edu
Sri Nagarajan Radiology sri@radiology.ucsf.edu
Mark Ratcliffe Surgery ratcliffe.mark_b@sanfrancisco.va.gov
Louis Reichardt Physiology and Biochemistry, Biophysics lfr@cgl.ucsf.edu
Philip Sabes Physiology sabes@phy.ucsf.edu
Christoph Schreiner Otolaryngology chris@phy.ucsf.edu
Michael Stryker Physiology stryker@phy.ucsf.edu
Kimberly Topp Physical Therapy and Rehabilitation Science kstopp@itsa.ucsf.edu
Robert Turner Neurosurgery rturner@itsa.ucsf.edu


© Program in Bioengineering, University of California
1700 4th St. MC0775, San Francisco, CA 94158-2330
Ph: 415 514-9242 // Fax 415 476-6022

Please direct all web comments to Jeffery Lowers

web site by aeronet